I had a bad experience a few years ago using pconnect() in a PHP program running in/on/under Apache on Linux to talk to a MySQL database. My memory is somewhat vague, but we had to restart the MySQL service (and switch to non-persistent connections). Ever since then, I've had an irrational fear of pconnect() and have never used it.
Looks like I'm not the only one who doesn't trust pconnect().
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